Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901545.1_cds_XP_016451588.1_45920
CDS Infomation

[gene=LOC107776232] [db_xref=GeneID:107776232] [protein=serine/threonine-protein kinase CTR1-like] [partial=3'] [protein_id=XP_016451588.1] [location=join(13964..14428,16641..16942,17031..17175,17395..17498,18704..18912,21366..21740,21944..21984,22343..22411,22570..22670,22761..22845,22930..23028,24174..24242,24350..>24481)] [gbkey=CDS]
Sequence

ATGGAAGTTTCTGGTAGACGATCGAATTATACTTTGTTGAATCAAATTCCTGACGATAAT
TTTGTCCAGCCGCCACCGCCGAAGTTCTCCGCCGGAGCTGACTTGATTGAGGACCGCATG
ATGCAATCACAGAGCCGGGTCGGATCATTGCAGTTACCCGGTTCGGGAGGGTCGCATAGG
CAATCAAGTGAAGGCAGCTTCGGTGGTAGCTCGATCTCCGGGGAGTACTACGCGGAGACT
TCCTTTGGGCTTAGAAATGATGGCTGCGGCTCGTCGGCGGCGGCAAGGAGTTGGGCGCTG
CAGACGGAGGAGAGTTACCAGCTGCAGTTAGCGTTGGCAATACGGCTCTCTTCAGAAGCA
ACCTGTGCTGATAATCCAAACTTCTTAGGTCCTGCGGCCGACGAATCAGCATCCCAAGAT
TCAGATTCTTCTGCATCAGCGGAAACAATGTCACATCGATTGTGGATAAATGGATGCTTA
TCGTACTTTGACAAAGTCCCTGATGGATTTTATTGGATATATGGGATGGATCCATATGTC
TGGACTGTCTGCTCAGTTCTGCAAGAAAGCGGCCGTATTCCATCAATTGAATCATTGAAG
GCAGTGGATCCCACTGTAGCACCATCTGTTGAAGTGATTTTAATTGATCGGTGTAACGAT
CCCAGCTTGAAGGAACTGCAGATTGGAATTCTTAGCATGTCCGCTAGTTGCATCAGCGTA
GAAGAAGTTGTTGATCAGCTTGCCAAGCTTGTCTGTGATCATATGGGGGGTGCAGCTCCT
GCTGGAGAAGATGACTTGGTTTCCATGTCGAAGGAGCGCAGTGATGAGCTCAAGGATTGT
CTAGGAACTATCGTGCTTCCAATTGGTAGCCTGTCAGTTGGGATTTGCAGGCACCGAGCG
TTGCTTTTTAAAGTGCTAGCTGACATAATTGATTTACCATGTCGAATTGCCAAGGGATGT
AAATATTGTAACAGATCCGATGCTTCCTCATGTCTAGTTCGATTAGGACTTGACAGGGAG
TACCTGGTTGATTTGGTCGGTAAGCCAGGAGTTTTATGCGAACCAGATTCCTTGATCAAT
GGTCCATCTTCCATCTCAATTCCTTCACCTTTGCGCTTTCCGAGATACAGACAAGTTGAA
CCTACAATTGATTTCAGGTCACTGGCCAAACAGTATTTCTTGGATAGTCAATCACTTAAT
CTACTGTTTGATGATTCTTCAGCTGGATCTGCAGCTGATGGAGATGCAGGACAATCAAAC
AGAAGTTGCATGGATAGAAACAATGCAGTCCCTAGTTCAAGTAACCGTGATGCAATTTCT
CGGCTACCTCTGCCTCCATCAAATGCATGGAAAAAGGGGCGTGATAAAGAATCTCAACTT
TCCAAAATGTATAATCCTTCAAGTATGTTAAACTCAATGAACGTGGACAAGGACCTGGTT
CCTGTGAAGCATGTCCCCCCATCAGGGGAAGATGTTCAACCACTGATGGCATTGTCTCAC
CCAAGAGCAGATACAATAAATGATGGAGAACTTCTTAGTGATGTAGAAGAGTTCAATATT
CCATGGAATGATCTGGTTCTGAAGGAGAGAATTGGGGCAGGGTCTTTTGGTACTGTTCAT
CGTGCTGATTGGGATGGCTCTGACGTTGCTGTGAAGATTCTCATGGAACAAAATTTTCAT
GCGGAGGGATTCAATGAATTTTTGCGGGAGGTTGCAATAATGAAGCGGTTGCGACATCCA
AATATTGTACTTTTTATGGGTGCTGTCATTCAGCCACCAAATTTGTCCATAGTTACTGAA
TATTTATCGAGAGGTAGCTTATATAGACTTCTTCATAGACCTGGTGCGAGAGAGTTGTTA
GATGAAAGACGTCGGCTGTGTATGGCTTACGATGTGGCAAATGGGATGAATTATCTTCAC
AAACGCAATCCTCCCATTGTTCACCGAGATTTAAAATCTCCAAATCTGCTAGTGGACAAA
AAATATACAGTGAAGGTCTGTGATTTTGGTCTTTCTCGTTTCAAAGCTAATACATTTCTT
TCATCAAAGACTGCTGCCGGAACTCCGGAATGGATGGCGCCTGAAGTTCTTCGTGATGAA
CCATCAAATGAGAAATCTGATGTATACAGCTTTGGCGTTATTTTATGGGAGTTGGCAACA
CTACAACAACCATGGAGTAATTTGAGCGCACCACAG

Peptide Sequence

PEP ID

XP_016451588.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase CTR1-like, partial [Nicotiana tabacum]
Sequence

MEVSGRRSNYTLLNQIPDDNFVQPPPPKFSAGADLIEDRMMQSQSRVGSLQLPGSGGSHR
QSSEGSFGGSSISGEYYAETSFGLRNDGCGSSAAARSWALQTEESYQLQLALAIRLSSEA
TCADNPNFLGPAADESASQDSDSSASAETMSHRLWINGCLSYFDKVPDGFYWIYGMDPYV
WTVCSVLQESGRIPSIESLKAVDPTVAPSVEVILIDRCNDPSLKELQIGILSMSASCISV
EEVVDQLAKLVCDHMGGAAPAGEDDLVSMSKERSDELKDCLGTIVLPIGSLSVGICRHRA
LLFKVLADIIDLPCRIAKGCKYCNRSDASSCLVRLGLDREYLVDLVGKPGVLCEPDSLIN
GPSSISIPSPLRFPRYRQVEPTIDFRSLAKQYFLDSQSLNLLFDDSSAGSAADGDAGQSN
RSCMDRNNAVPSSSNRDAISRLPLPPSNAWKKGRDKESQLSKMYNPSSMLNSMNVDKDLV
PVKHVPPSGEDVQPLMALSHPRADTINDGELLSDVEEFNIPWNDLVLKERIGAGSFGTVH
RADWDGSDVAVKILMEQNFHAEGFNEFLREVAIMKRLRHPNIVLFMGAVIQPPNLSIVTE
YLSRGSLYRLLHRPGARELLDERRRLCMAYDVANGMNYLHKRNPPIVHRDLKSPNLLVDK
KYTVKVCDFGLSRFKANTFLSSKTAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT
LQQPWSNLSAPQ

Transcript Sequence

Gene sequence data has not been registered.